Parallelization of multiple genome alignment

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DC Field	Value	Language
dc.contributor.author	Li, YM	en_US
dc.contributor.author	Chen, CK	en_US
dc.date.accessioned	2014-12-08T15:37:07Z	-
dc.date.available	2014-12-08T15:37:07Z	-
dc.date.issued	2005	en_US
dc.identifier.isbn	3-540-29031-1	en_US
dc.identifier.issn	0302-9743	en_US
dc.identifier.uri	http://hdl.handle.net/11536/25497	-
dc.description.abstract	In this work, we implement a genome alignment system which applies parallelization schemes to the ClustalW algorithm and the interface of database querying. Parallel construction of the distance matrices and parallelization of progressive alignment in the ClustalW algorithm are performed on PC-based Linux cluster with message-passing interface libraries. Achieved experiments show good speedup and significant parallel performance.	en_US
dc.language.iso	en_US	en_US
dc.title	Parallelization of multiple genome alignment	en_US
dc.type	Article; Proceedings Paper	en_US
dc.identifier.journal	HIGH PERFORMANCE COMPUTING AND COMMUNICATIONS, PROCEEDINGS	en_US
dc.citation.volume	3726	en_US
dc.citation.spage	910	en_US
dc.citation.epage	915	en_US
dc.contributor.department	電信工程研究所	zh_TW
dc.contributor.department	友訊交大聯合研發中心	zh_TW
dc.contributor.department	Institute of Communications Engineering	en_US
dc.contributor.department	D Link NCTU Joint Res Ctr	en_US
dc.identifier.wosnumber	WOS:000233593200099	-
Appears in Collections:	Conferences Paper